Publications

BibTex

2010

[38] Andrew Cunningham, Kai Xu, and Bruce Thomas, "Seeing More Than the Graph - Evaluation of Multivariate Graph Visualization Methods", Proceedings of the Workshop on Interactive Data Exploration and Knowledge Discovery (part of the International Working Conference on Advanced Visual Interfaces 2010), to appear, May 2010, Rome, Italy. PDF

2009

[37] Kai Xu, Rohan Williams, Seok-Hee Hong, Qing Liu, and Ji Zhang, "Semi-Bipartite Graph Visualization for Gene Ontology Networks", Proceedings of the 17th International Symposium on Graph Drawing (GD'09), 244-255, September 2009. Chicago, USA. PDF

[36] Adel Ahmed, Xiaoyan Fu, Seok-Hee Hong, Quan Hoang Nguyen, and Kai Xu, "Visual Analysis of History of World Cup: A Dynamic Network with Dynamic Hierarchy and Geographic Clustering", Proceedings of the Visual Information Communications International 2009 (VINCI'09), 25-39, September 2009. Sydney, Australia. PDF

[35] Ji Zhang, Qigang Gao, Hai H. Wang, Qing Liu, and Kai Xu, "Detecting Projected Outliers in High-Dimensional Data Streams", Proceedings of the 20th International Conference on Database and Expert Systems Applications (DEXA'09), 629-644, September 2009. Linz, Austria. PDF

[34] Ji Zhang, Qing Liu, and Kai Xu, "Gene Specific Co-regulation Discovery: An Improved Approach", Proceedings of the 9th International Conference on Computational Science (ICCS'09) - Part I, 838-847, May 2009. Louisiana, USA. PDF

[33] David Cho Yau Fung, Seok-Hee Hong, Dirk Koschutzki, Falk Schreiber, and Kai Xu, "Visual Analysis of Overlapping Biological Networks", Proceedings of the 13th International Conference on Information Visualisation (IV'09), 337-342, July 2009. Barcelona, Spain. PDF

[32] Ji Zhang, Qing Liu, and Kai Xu, "FlowRecommender: a workflow recommendation technique for process provenance", Proceedings of the Eighth Australasian Data Mining Conference (AusDM'09), December 2009. Brisbane, Australia. PDF

[31] Xuan Zhou, Shiping Chen, Athman Bouguettaya, and Kai Xu, "Supporting Bioinformatic Experiments with a Service Query Engine", Proceedings of the 2009 IEEE Congress on Services (SERVICES'09) - I, 717-723, July 2009. Los Angeles, USA. PDF

[30] Harry Rolf, Kai Xu, and Christopher Lueg, "Visual Virtual Community", Proceedings of the 1st Australian Designing for Healthy Living Workshop, November 2009. Melbourne, Australia.

[29] Kai Xu, "Survey of bioinformatics workflow provenance visualization", 09/229, CSIRO, 2009.

[28] Kai Xu, Xiaoxuan Huang, Nicholas A. Shackel, Devanshi Seth, Seok-Hee Hong, Chris J. Cotsapas, Mark D. Gorrell, Peter F.R. Little, Geoffrey W. McCaughan, and Rohan B.H. Williams, "Combined visualisation and analysis of Gene Ontology annotations using multivariate representations of annotations and bipartite networks", 09/166, CSIRO, 2009.

2008

[27] Ke Deng, Xiaofang Zhou, Heng Tao Shen, Qing Liu, Kai Xu, and Xuemin Lin, "A multi-Resolution Surface Distance Model for k-NN Query Processing", The VLDB Journal, 17(5):1101-1119, 2008. PDF

[26] David Cho Yau Fung, Seok-Hee Hong, Dirk Koschutzki, Falk Schreiber, and Kai Xu, "2.5D Visualisation of Overlapping Biological Networks", Journal of Integrative Bioinformatics, 5(1):90, 2008. PDF

[25] David C. Y. Fung, Seok-Hee Hong, Kai Xu, and David Hart, "Visualizing the Gene Ontology-Annotated Clusters of Co-expressed Genes: A Two-Design Study", Proceedings of the Fifth International Conference BioMedical Visualization: Information Visualization in Medical and Biomedical Informatics, 9-14, July 2008. London, UK. PDF

[24] Athman Bouguettaya, Mark Hepburn, Qing Liu, Kai Xu, and Ji Zhang, "Bio-Sense: A System for Supporting Sharing and Exploration in Bioinformatics Using Semantic Web Services", Proceedings of the Fourth IEEE International Conference on eScience, 452-453, December 2008. Indianapolis, USA. PDF

[23] Ji Zhang, Qing Liu, and Kai Xu, "Gene Specific Co-regulation Discovery from Gene Microarray Data", Proceedings of the 19th International Conference on Genome Informatics, December 2008. Gold coast, Australia.

[22] Kai Xu, Athman Bouguettaya, Mark Hepburn, Qing Liu, and Ji Zhang, "Bio-SENSE: Semantic Web Services for Bioinformatics Provenance", Proceedings of the CSIRO ICT Center conference 2008, November 2008. Sydney, Australia.

[21] Kai Xu, "Survey of Semantic Web Service-based Bioinformatics Systems", 08/230, CSIRO, 2008.

2007

[20] Kai Xu, Andrew Cunningham, Seok-Hee Hong, and Bruce H. Thomas, "GraphScape: integrated multivariate network visualization", Proceedings of the 6th International Asia-Pacific Symposium on Visualization (APVIS'07), 33-40, Februray 2007. Sydney, Australia. PDF

[19] Xiaoyan Fu, Seok-Hee Hong, Nikola S. Nikolov, Xiaobin Shen, Yingxin Wu, and Kai Xu, "Visualization and analysis of email networks", Proceedings of the 6th International Asia-Pacific Symposium on Visualization (APVIS'07), 1-8, February 2007. Sydney, Australia. PDF

[18] Adel Ahmed, Xiaoyan Fu, Seok-Hee Hong, Quan Hoang Nguyen, and Kai Xu, "Visual Analysis of Dynamic Networks with Geological Clustering", Proceedings of the 2007 IEEE Symposium on Visual Analytics Science and Technology, 221-222, October 2007. Sacramento, USA.

2006

[17] Kai Xu, Xiaofang Zhou, Xuemin Lin, Heng Tao Shen, and Ke Deng, "A Multiresolution Terrain Model for Efficient Visualization Query Processing", IEEE Transaction on Knowledge and Data Engineering (TKDE), 18(10):1382-1396, 2006. PDF

[16] Carsten Gorg, Mathias Pohl, Ermir Qeli, and Kai Xu, "Visual Representations", Human-Centered Visualization Environments, 163-230, 2006. Springer.

[15] Mircea Lungu and Kai Xu, "Biomedical Information Visualization", Human-Centered Visualization Environments, 311-342, 2006. Springer.

[14] Ke Deng, Heng Tao Shen, Kai Xu, and Xuemin Lin, "Surface k-NN Query Processing", Proceedings of the 22nd International Conference on Data Engineering (ICDE'06), 78, April 2006. Atlanta, USA. PDF

[13] Joshua Wing Kei Ho, Tristan Manwaring, Seok-Hee Hong, Uwe Roehm, David Cho Yau Fung, Kai Xu, Tim Kraska, and David Hart, "PathBank: Web-Based Querying and Visualziation of an Integrated Biological Pathway Database", Proceedings of the International Conference on Computer Graphics, Imaging and Visualisation (CGIV'06), 84-89, July 2006. Sydney, Australia. PDF

[12] Kai Xu, "Web-Based Genomic Information Integration with Gene Ontology", Proceedings of the 8th Asia-Pacific Web Conference (APWEB'06), 812-817, January 2006. Harbin, China. PDF

[11] Tim Dwyer, Seok-Hee Hong, Dirk Koschutzki, Falk Schreiber, and Kai Xu, "Visual analysis of network centralities", Proceedings of the 2006 Asia-Pacific Symposium on Information Visualisation (APVIS'06), 189-197, February 2006. Sydney, Australia. PDF

[10] Kai Xu, Xiaoxuan Huang, Nicholas A. Shackel, Devanshi Seth, Seok-Hee Hong, Chris J. Cotsapas, Mark D. Gorrell, Peter F.R. Little, Geoffrey W. McCaughan, and Rohan B.H. Williams, "Multi-Scale Visualization and Function Analysis of Gene Ontology Network for High-Throughput Experiments", Proceedings of Bioinformatics Australia 2006, November 2006. Sydney, Australia.

[9] Xiaoyan Fu, Seok-Hee Hong, Nikola S. Nikolov, Xiaobin Shen, Yingxin Wu, and Kai Xu, "Visualization and Analysis of Small-World Email Networks", Proceedings of the 12th annual IEEE Symposium on Information Visualization (INFOVIS'06), October 2006. Baltimore, USA.

[8] Kai Xu, Xiaoxuan Huang, Chris J. Cotsapas, Seok-Hee Hong, Geoffrey W. McCaughan, Mark D. Gorrell, Peter F.R. Little, and Rohan B.H. Williams, "Gene Ontology Network Visualization and Analysis", Proceedings of the 14th International Conference on Intelligent Systems for Molecular Biology (ISMB'06), August 2006. Fortaleza, Brazil.

2005

[7] Adel Ahmed, Tim Dwyer, Michael Forster, Xiaoyan Fu, Joshua Wing Kei Ho, Seok-Hee Hong, Dirk Koschutzki, Colin Murray, Nikola S. Nikolov, Ronnie Taib, Alexandre Tarassov, and Kai Xu, "GEOMI: GEOmetry for Maximum Insight", Proceedings of the 13th International Symposium on Graph Drawing (GD'05), 468-479, September 2005. Limerick, Ireland. PDF

[6] Kai Xu and Xiaofang Zhou, "Multiresolution Query Optimization in an Online Environment", Proceedings of the 7th Asia-Pacific Web Conference (APWEB'05),, 730-741, March 2005. Shanghai, China. PDF

2004

[5] Kai Xu, Xiaofang Zhou, and Xuemin Lin, "Direct Mesh: a Multiresolution Approach to Terrain Visualization", Proceedings of the 20th International Conference on Data Engineering (ICDE'04), 766-777, March 2004. Boston, USA. PDF

[4] Xiaofang Zhou, Sham Prasher, Sai Sun, and Kai Xu, "Multiresolution Spatial Databases: Making Web-Based Spatial Applications Faster", Proceedings of the 6th Asia-Pacific Web Conference (APWEB'04), 36-47, April 2004. Hangzhou, China. PDF

2003

[3] Kai Xu, "Database support for multiresolution terrain visualization", Proceedings of the 14th Australasian database conference (ADC'03), 153-160, Januray 2003. Adelaide, Australia. PDF

2002

[2] Kai Xu and Xiaofang Zhou, "Secondary Storage Terrain Visualization in a Client-server Environment: A Survey", Proceedings of International Conference on Networks, Parallel and Distributed Processing, and Applications (NPDPA'02), 206-210, October 2002. Tsukuba, Japan. PDF

[1] Kai Xu, "Multiresolution terrain database visualization", Proceedings of the 8th International Conference on Extending Database Technology (EDBT'02) PhD workshop, March 2002. Prague, Czech Republic.